D. Joyce, 'Compact manifolds with special holonomy', 436 pages, Oxford
Mathematical Monographs series, OUP, July 2000. Reprinted 2003. Reprinted 2006
(twice).

-- Buy it on on the Web from OUP or Amazon.

M. Gross, D. Huybrechts and D. Joyce, 'Calabi-Yau Manifolds and Related
Geometries', 239 pages, Universitext series, Springer, Berlin, 2003.

-- Buy it on on the Web from Springer
or Amazon.

D. Joyce, 'Riemannian holonomy groups and calibrated geometry', 303 pages,
Oxford Graduate Texts in Mathematics 12, OUP, March 2007.

-- Buy it on on the Web from OUP in paperback or hardback, or from
Amazon in paperback or hardback.

D. Joyce and Y. Song, 'A theory of generalized Donaldson-Thomas invariants',
216 pages, Memoirs of the AMS 217 (2012), no. 1020. Published online here.

-- Also available on the Web as arXiv:0810.5645.

D. Joyce, 'Algebraic Geometry over C^{∞}-rings', Memoirs of
the A.M.S. 260 (2019), no. 1256. Published online here.

-- Also available on the Web as arXiv:1001.0023.

J. Gillis and D. Joyce, 'Some results on combinatorial interpretations for the integral of the product of several classical orthogonal polynomials', Oxford Quarterly Journal of Mathematics 42 (1991), 57-75.

D. Joyce, 'The hypercomplex quotient and the quaternionic quotient', Mathematische Annalen 290, (1991), 323-340. pdf file

D. Joyce, 'Compact hypercomplex and quaternionic manifolds', Journal of Differential Geometry 35 (1992), 743-761.

D. Joyce, 'A twistor transform for complex manifolds with connection', Twistor Newsletter 35 (1992), 11-14. postscript file

D. Joyce, 'Manifolds with many complex structures', Oxford Quarterly Journal of Mathematics 46 (1995), 169-184. postscript file

D. Joyce, 'Explicit construction of self-dual 4-manifolds', Duke Mathematical Journal 77 (1995), 519-552. postscript file

D. Joyce, 'Compact 8-manifolds with holonomy Spin(7)', Inventiones mathematicae 123 (1996), 507-552. postscript file

D. Joyce, 'Compact Riemannian 7-manifolds with holonomy G_{2}. I',
Journal of Differential Geometry 43 (1996), 291-328. postscript file

D. Joyce, 'Compact Riemannian 7-manifolds with holonomy G_{2}. II',
Journal of Differential Geometry 43 (1996), 329-375. postscript file

D. Joyce, 'Hypercomplex Algebraic Geometry', Oxford Quarterly Journal of Mathematics 49 (1998), 129-162. postscript file

D. Joyce, 'Deforming Calabi-Yau orbifolds', Asian Journal of Mathematics 3 (1999), 853-868. postscript file

D. Joyce, 'A new construction of compact 8-manifolds with holonomy Spin(7)',
Journal of Differential Geometry 53 (1999), 89-130.

-- Also available on the web as math.DG/9910002.

D. Joyce, 'Asymptotically Locally Euclidean metrics with holonomy SU(m)',
Annals of Global Analysis and Geometry 19 (2001), 55-73.

-- Also available on the Web as math.AG/9905041.

D. Joyce, 'Quasi-ALE metrics with holonomy SU(m) and Sp(m)', Annals of
Global Analysis and Geometry 19 (2001), 103-132.

-- Also available on the Web as math.AG/9905043.

D. Joyce, 'Constructing special Lagrangian m-folds in ℂ^{m} by evolving quadrics', Mathematische
Annalen 320 (2001), 757-797.

-- Also available on the Web as math.DG/0008155.

D. Joyce, 'Evolution equations for special Lagrangian 3-folds in
ℂ^{3}', Annals of Global Analysis and Geometry 20 (2001),
345-403.

-- Also available on the Web as math.DG/0010036.

D. Joyce, 'Ruled special Lagrangian 3-folds', Proceedings of the London
Mathematical Society 85 (2002), 233-256.

-- Also available on the Web as math.DG/0012060.

D. Joyce, 'Special Lagrangian m-folds in ℂ^{m} with symmetries', Duke Mathematical Journal 115
(2002), 1-51.

-- Also available on the Web as math.DG/0008021.

D. Joyce, 'Constant Scalar Curvature Metrics on Connected Sums',
International Journal of Mathematics and Mathematical Sciences 2003:7 (2003),
405-450.

-- Also available on the Web as math.DG/0108022.

D. Joyce, 'U(1)-invariant special Lagrangian 3-folds in ℂ^{3}^{} and
special Lagrangian fibrations', Turkish Journal of Mathematics 27 (2003),
99-114.

-- Also available on the Web as math.DG/0206016.

D. Joyce, 'Special Lagrangian submanifolds with isolated conical
singularities. V. Survey and applications', Journal of Differential Geometry 63
(2003), 279-347.

-- Also available on the Web as math.DG/0303272.

D. Joyce, 'Singularities of special Lagrangian fibrations and the SYZ
Conjecture', Communications in Analysis and Geometry 11 (2003), 859-907.

-- Also available on the Web as math.DG/0011179.

D. Joyce, 'Special Lagrangian submanifolds with isolated conical
singularities. I. Regularity', Annals of Global Analysis and Geometry 25
(2004), 201-251.

-- Also available on the Web as math.DG/0211294.

D. Joyce, 'Special Lagrangian submanifolds with isolated conical
singularities. II. Moduli spaces', Annals of Global Analysis and Geometry 25
(2004), 301-352.

-- Also available on the Web as math.DG/0211295.

D. Joyce, 'Special Lagrangian submanifolds with isolated conical
singularities. III. Desingularization, the unobstructed case', Annals of Global
Analysis and Geometry 26 (2004), 1-58.

-- Also available on the Web as math.DG/0302355.

D. Joyce, 'Special Lagrangian submanifolds with isolated conical
singularities. IV. Desingularization, obstructions and families', Annals of
Global Analysis and Geometry 26 (2004), 117-174.

-- Also available on the Web as math.DG/0302356.

D. Joyce, 'U(1)-invariant special Lagrangian 3-folds I. Nonsingular
solutions', Advances in Mathematics 192 (2005), 35-71.

-- Also available on the Web as math.DG/0111324.

D. Joyce, 'U(1)-invariant special Lagrangian 3-folds II. Existence of
singular solutions', Advances in Mathematics 192 (2005), 72-134.

-- Also available on the Web as math.DG/0111326.

D. Joyce, 'U(1)-invariant special Lagrangian 3-folds III. Properties of
singular solutions', Advances in Mathematics 192 (2005), 135-182.

-- Also available on the Web as math.DG/0204343.

D. Joyce and S. Salur, 'Deformations of Asymptotically Cylindrical
coassociative submanifolds with cylindrical ends', Geometry and Topology 9
(2005), 1115-1146.

-- Also available on the Web as math.DG/0408137.

D. Joyce, 'Configurations in abelian categories. I. Basic properties and
moduli stacks', Advances in Mathematics 203 (2006), 194-255. doi:
10.1016/j.aim.2005.04.008.

-- Also available on the Web as math.AG/0312190.

D. Joyce, 'Constructible functions on Artin stacks', Journal of the London
Mathematical Society 74 (2006), 583-606.

-- Also available on the Web as math.AG/0403305.

D. Joyce, 'Configurations in abelian categories. II. Ringel-Hall algebras',
Advances in Mathematics 210 (2007), 635-706. doi:
10.1016/j.aim.2006.07.006.

-- Also available on the Web as math.AG/0503029.

D. Joyce, 'Holomorphic generating functions for invariants counting coherent
sheaves on Calabi-Yau 3-folds', Geometry and Topology 11 (2007), 667-725.

-- Also available on the Web as hep-th/0607039.

D. Joyce, 'Motivic invariants of Artin stacks and 'stack functions' ',
Quarterly Journal of Mathematics 58 (2007), 345-392. doi: 10.1093/qmath/ham019.

-- Also available on the Web as math.AG/0509722.

D. Joyce, 'Configurations in abelian categories. III. Stability conditions
and identities', Advances in Mathematics 215 (2007), 153-219. doi:
10.1016/j.aim.2007.04.002.

-- Also available on the Web as math.AG/0410267.

D. Joyce, 'Configurations in abelian categories. IV. Invariants and changing
stability conditions', Advances in Mathematics 217 (2008), 125-204. doi:
10.1016/j.aim.2007.06.011.

-- Also available on the Web as math.AG/0410268.

D. Joyce, Y.-I. Lee and M.-P. Tsui, 'Self-similar solutions and translating
solitons for Lagrangian mean curvature flow', Journal of Differential Geometry
84 (2010), 127-161.

-- Also available on the Web as arXiv:0801.3721.

M. Akaho and D. Joyce, 'Immersed Lagrangian Floer theory', Journal of
Differential Geometry 86 (2010), 381-500. PDF
file.

-- Also available on the Web as arXiv:0803.0717.

D. Joyce, Y.-I. Lee and R. Schoen, 'On the existence of Hamiltonian
stationary Lagrangian submanifolds in symplectic manifolds', American Journal
of Mathematics 133 (2011), 1067-1092.

-- Also available on the Web as arXiv:0902.3338.

-- Also available on the Web as arXiv:1312.0090.

D. Joyce, 'Conjectures on Bridgeland stability for Fukaya categories of
Calabi-Yau manifolds, special Lagrangians, and Lagrangian mean curvature flow',
EMS Surveys in Mathematical Sciences 2 (2015), 1-62.

-- Also available on the Web as arXiv:1401.4949.

C. Brav, V. Bussi, D. Dupont, D. Joyce, and B. Szendröi, 'Symmetries and
stabilization for sheaves of vanishing cycles', Journal of Singularities 11
(2015), 85-151.

-- Also available on the Web as arXiv:1211.3259.

D. Joyce, 'A classical model for derived critical loci', Journal of
Differential Geometry 101 (2015), 289-367.

-- Also available on the Web as arXiv:1304.4508.

Y. Imagi, D. Joyce, and J. Oliveira dos Santos, 'Uniqueness results for
special Lagrangians and Lagrangian mean curvature flow expanders in , Duke
Mathematical Journal 165 (2016), 847-933.

-- Also available on the Web as arXiv:1404.0271.

D. Joyce, 'A generalization of manifolds with corners', Advances in
Mathematics 299 (2016), 760-862. open access pdf
file

-- Also available on the Web as arXiv:1501.00401.

D. Borisov and D. Joyce, 'Virtual fundamental classes for moduli spaces of
sheaves on Calabi-Yau four-folds', Geometry and Topology 21 (2017),
3231–3311.

-- Also available on the Web as arXiv:1504.00690.

C. Brav, V. Bussi, and D. Joyce, 'A "Darboux theorem" for derived schemes
with shifted symplectic structure', Journal of the AMS 32 (2019), 399-443.

-- Also available on the Web as arXiv:1305.6302.

V. Bussi, D. Joyce, and S. Meinhardt, 'On motivic vanishing cycles of
critical loci', Journal of Algebraic Geometry 28 (2019), 405-438.

-- Also available on the Web as arXiv:1305.6428.

D. Joyce, Y. Tanaka, and M. Upmeier, 'On orientations for gauge-theoretic
moduli spaces', Advances in Mathematics 362 (2020), doi https://doi.org/10.1016/j.aim.2019.106957.

-- Also available on the Web as arXiv:1811.01096.

Y. Cao, J. Gross and D. Joyce, 'Orientability of moduli spaces of
Spin(7)-instantons and coherent sheaves on Calabi-Yau 4-folds', Advances in
Mathematics 368 (2020), doi https://doi.org/10.1016/j.aim.2020.107134.

-- Also available on the Web as arXiv:1811.09658.

D. Joyce, 'Compact Riemannian manifolds with exceptional holonomy', pages 39-65 in 'Essays on Einstein Manifolds', editors C. LeBrun and M. Wang, Surveys in Differential Geometry VI, International Press, Cambridge, MA, 1999. postscript file

D. Joyce, 'Singularities of special Lagrangian submanifolds', pages 163-198
in 'Different Faces of Geometry', editors S.K. Donaldson, Y. Eliashberg and M.
Gromov, International Mathematical
Series volume 3, Kluwer/Plenum, 2004. Also to appear in Russian
translation.

-- Also available on the Web as math.DG/0310460.

D. Joyce, 'Calibrated geometry and special Lagrangian submanifolds', volume 1, pages 398-402 in J.-P. Françoise, G. Naber and T.S. Tsou, editors, Encyclopedia of Mathematical Physics, Elsevier, 2006.

D. Joyce, 'Riemannian holonomy groups and exceptional holonomy', volume 4, pages 441-446 in J.-P. Françoise, G. Naber and T.S. Tsou, editors, Encyclopedia of Mathematical Physics, Elsevier, 2006.

D. Joyce, 'Generalized Donaldson-Thomas invariants', pages 125-160 in
'Geometry of special holonomy and related topics', editors N.C. Leung and S.-T.
Yau, Surveys in Differential Geometry XVI, International Press, Cambridge,
MA,(2011).

-- Also available on the Web as arXiv:0910.0105.

D. Joyce, 'Conjectures on counting associative 3-folds in G_{2}-manifolds', pages 97-160 in V.
Muñoz, I. Smith and R.P. Thomas, editors, 'Modern Geometry: A Celebration of the Work of
Simon Donaldson', Proceedings of Symposia in Pure Math. 99, A.M.S.,
Providence, RI, 2018.

-- Also available on the Web as arXiv:1610.09836.

D. Joyce, 'Kuranishi spaces as a 2-category', pages 253-298 in John Morgan,
editor, 'Virtual Fundamental Cycles in
Symplectic Topology', Mathematical Surveys and Monographs 237, A.M.S.,
2019.

-- Also available on the Web as arXiv:1510.07444.

D. Joyce, 'Compact manifolds with exceptional holonomy', pages 245-252 in 'Geometry and Physics', editors J.E. Andersen, J. Dupont, H. Pedersen and A. Swann, Lecture notes in pure and applied math. vol. 184, Marcel Dekker, New York, 1997. postscript file

D. Joyce, 'Compact manifolds with exceptional holonomy', pages 361-370 in Proceedings of the International Congress of Mathematicians, Berlin, 1998, vol II. Documenta Mathematica, University of Bielefeld, 1998. Published online.

D. Joyce, 'A theory of quaternionic algebra, with applications to
hypercomplex geometry', pages 143-194 in Proceedings of the Second Meeting on
Quaternionic Structures in Mathematics and Physics, Rome, 1999, editors S.
Marchiafava, P. Piccinni and M. Pontecorvo, World Scientific, Singapore, 2001.

-- Also available in the math archive as math.DG/0010079.

D. Joyce, 'Constructing compact 8-manifolds with holonomy Spin(7)from Calabi-Yau orbifolds', pages 21-30 in Volume II of Proceedings of the 3rd European Congress of Mathematics, Barcelona, July 10-14, 2000, editors C. Casuberta, R.M. Miró-Roig, J. Verdera and S. Xambó-Descamps, Progress in Mathematics 202, Birkhäuser, Basel, 2001. postscript file

D. Joyce, 'On counting special Lagrangian homology 3-spheres', pages 125-151
in 'Topology and Geometry: Commemorating SISTAG', editors A.J. Berrick, M.C.
Leung and X.W. Xu, Contemporary Mathematics volume 314, A.M.S., 2002.

-- Also available on the Web as hep-th/9907013.

D. Joyce, 'Constructing compact manifolds with exceptional holonomy', pages
177-191 in M. Douglas, J. Gauntlett and M. Gross, editors, 'Strings and
Geometry', Clay Mathematics Proceedings 3, A.M.S., 2004.

-- Also available on the Web as math.DG/0203158.

D. Joyce, 'Lectures on special Lagrangian geometry', pages 667-695 in D.
Hoffman, editor, 'Global Theory of Minimal Surfaces', Clay Mathematics
Proceedings 2, A.M.S., 2005.

-- Also available on the Web as math.DG/0111111.

D. Joyce, 'The exceptional holonomy groups and calibrated geometry', pages
110-139 in S. Akbulut, T. Önder and R.J. Stern, editors, 'Proceedings of the
Gökova Geometry-Topology Conference 2005', International Press, Somerville, MA,
2006. Published
online.

-- Also available on the Web as math.DG/0406011.

D. Joyce, 'Special Lagrangian 3-folds and integrable systems', pages 189-233
in M. Guest, R. Miyaoka and Y. Ohnita, editors, 'Surveys on Geometry and
Integrable Systems', Advanced Studies in Pure Mathematics 51, Mathematical
Society of Japan, 2008.

-- Also available on the Web as math.DG/0101249.

D. Joyce, 'An introduction to C^{∞}-schemes and
C^{∞}-algebraic geometry', pages 299-325 in H.-D. Cao and S.-T.
Yau, editors, Surveys in Differential Geometry 17 (2012), Lectures given at the
JDG symposium, June 2010, in memory of C.C. Hsiung.

-- Also available on the Web as arXiv:1104.4951.

D. Joyce, 'On manifolds with corners', pages 225-258 in S. Janeczko, J. Li
and D.H. Phong, editors, 'Advances in Geometric Analysis', Advanced Lectures in
Mathematics 21, International Press, Boston, 2012.

-- Also available on the Web as arXiv:0910.3518.

-- Also available on the Web as arXiv:1206.4207.

D. Joyce and P. Safronov, 'A Lagrangian Neighbourhood Theorem for shifted
symplectic derived schemes', to appear in Annales de la Faculte des Sciences de
Toulouse.

-- Also available on the Web as arXiv:1506.04024.

D. Joyce and S. Karigiannis, 'A new construction of compact G_{2}-manifolds by gluing families
of Eguchi-Hanson spaces', to appear in the Journal of Differential Geometry.

-- Also available on the Web as arXiv:1707.09325.

D. Joyce, 'Ringel-Hall style vertex algebra and Lie algebra structures on the homology of moduli spaces', incomplete preprint, March 2018. pdf file. Comments welcome.

D. Joyce, 'On the topology of deformations of Calabi-Yau orbifolds', math.AG/9806146, 1998. 25
pages.

(A rather longer version of 'Deforming Calabi-Yau orbifolds', Asian J. Math. 3
(1999), 853-868.)

D. Joyce, 'Lectures on Calabi-Yau and special Lagrangian geometry', math.DG/0108088, version 3,
June 2002. 58 pages.

(An expanded version of this is published as Part I of our book, M. Gross, D.
Huybrechts and D. Joyce, 'Calabi-Yau Manifolds and Related Geometries',
Springer, 2003. See top of page.)

D. Joyce, 'Kuranishi homology and Kuranishi cohomology', arXiv:0707.3572, version 5, October 2008. 290 pages.

D. Joyce, 'Kuranishi homology and Kuranishi cohomology: a User's Guide', arXiv:0710.5634, version 2, October 2008. 29 pages.

D. Joyce, 'D-manifolds, d-orbifolds and derived differential geometry: a detailed summary', arXiv:1208.4948, version 2, December 2012. 173 pages.

D. Joyce, 'A new definition of Kuranishi space', arXiv:1409.6908, version 3, October 2015. 193 pages.

D. Joyce, 'Some new homology and cohomology theories of manifolds and orbifolds', arXiv:1509.05672, September 2015. 232 pages.

D. Joyce, 'Manifolds with analytic corners', arXiv:1605.05913, May 2016. 73 pages.

D. Joyce and M. Upmeier, 'Canonical orientations for moduli spaces of
G_{2}-instantons with gauge group SU(m) or U(m)', arXiv:1811.02405, November 2018. 29
pages.

D. Joyce and M. Upmeier, 'On spin structures and orientations for gauge-theoretic moduli spaces', arXiv:1908.03524, August 2019. 53 pages.

K. Francis-Staite and D. Joyce, 'C^{∞}-algebraic geometry with
corners', arXiv:1911.01088,
November 2019. 148 pages.

D. Joyce and M. Upmeier, 'Orientation data for moduli spaces of coherent sheaves over Calabi-Yau 3-folds', arXiv:2001.00113, January 2020. 45 pages.

J. Gross, D. Joyce and Y. Tanaka, 'Universal structures in ℂ-linear enumerative invariant theories. I', arXiv:2005.05637, May 2020. 73 pages.